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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4283461_4283999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4283461 - 4283999

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TGCCCCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAC

U12 Branch Point Sequence:

AACCTCTTACCT

Flanking Amino Acid:

RGQACTKIIWRCVQQLKQDG

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.1

37.5

Major BPS

72.4

0.56

79.3

29.5

Major PPT

72.3

0.5

0.8

69.1

31.4

Minor 5ss

25.6

-2.8

3.1

31.9

42.9

Minor BPS

55.5

0.25

1.6

68.52

42.2

Associated Gene:

Gene:

POLRMT

Ensembl Gene ID:

ENSAPLG00000003051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003126

4272224 - 4286117

13894