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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4285169_4285817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4285169 - 4285817

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

TGGCGCTTCACC

Flanking Amino Acid:

VVCERTELLEVLKARVKQLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

69.5

41.5

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

0.76

0.8

78.1

30.7

Minor 5ss

31.4

-2.1

3.2

40.6

45.6

Minor BPS

47.7

-0.2

2.2

60.38

44.6

Associated Gene:

Gene:

POLRMT

Ensembl Gene ID:

ENSAPLG00000003051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003126

4272224 - 4286117

13894