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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4293789_4294050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4293789 - 4294050

Intron Length:

262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTCGG

5'SS Class:

major

3'SS Sequence:

CCTCCCCTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CCCCGCTCACCC

Flanking Amino Acid:

MNKQGRLYGSKEFSPNCKFK

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.9

49.4

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

68.7

0.42

0.9

61.2

Minor 5ss

32.7

-2

3.2

41.1

45.2

Minor BPS

39.7

-0.8

2.1

43.27

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039074

4292880 - 4294245

1366