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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4294265_4297821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4294265 - 4297821

Intron Length:

3557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAACGAAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTTTTTTCCACA

Flanking Amino Acid:

SSSSSSSSSPRPSGSQAQLM

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.2

68.6

Major BPS

78.6

0.71

78.6

Major PPT

91.4

0.93

0.6

87.9

22.3

Minor 5ss

38.8

-1.3

3.2

48.2

42.2

Minor BPS

55.3

0.16

74.67

37.4

Associated Gene:

Gene:

RNF126

Ensembl Gene ID:

ENSAPLG00000002542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039441

4292749 - 4300729

7981