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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4299002_4299227_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4299002 - 4299227

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGTA

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

CTGCCCTGTATG

Flanking Amino Acid:

ANGLDAIITQLLNQFENTGP

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.6

30.5

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

87.4

0.84

0.8

85.1

34.9

Minor 5ss

33.4

-1.9

3.6

46.9

48.4

Minor BPS

45.9

-0.4

1.9

49.36

44.4

Associated Gene:

Gene:

RNF126

Ensembl Gene ID:

ENSAPLG00000002542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039441

4292749 - 4300729

7981

ENSAPLT00000002591

4296814 - 4300729

3916