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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4299298_4299374_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4299298 - 4299374

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTTATTCTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTATTCTTAAAG

Flanking Amino Acid:

TTIPNLGLGPWGVLHSNPMD

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.8

78.1

26.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

74.5

0.55

74.7

33.9

Minor 5ss

34.2

-1.8

2.8

36.8

41.9

Minor BPS

72.1

0.56

1.4

73.39

38.7

Associated Gene:

Gene:

RNF126

Ensembl Gene ID:

ENSAPLG00000002542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039441

4292749 - 4300729

7981

ENSAPLT00000002591

4296814 - 4300729

3916