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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4299444_4299748_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4299444 - 4299748

Intron Length:

305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGAG

5'SS Class:

major

3'SS Sequence:

TCTTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATC

Flanking Amino Acid:

GRHEGVPTLEGIIQQLVNGI

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

59.3

41.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.1

0.84

0.7

84.6

30.3

Minor 5ss

29.8

-2.3

3.2

43.5

Minor BPS

75.4

0.78

1.1

33.7

Associated Gene:

Gene:

RNF126

Ensembl Gene ID:

ENSAPLG00000002542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039441

4292749 - 4300729

7981

ENSAPLT00000002591

4296814 - 4300729

3916