Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_4299991_4300585_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4299991 - 4300585

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

TGCTCCTGAATT

Flanking Amino Acid:

TSDQSRHPFENVDQHLFTLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

69.6

0.49

59.5

Major PPT

73.7

0.53

0.7

66.3

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

71.4

0.75

1.4

81.73

39.8

Associated Gene:

Gene:

RNF126

Ensembl Gene ID:

ENSAPLG00000002542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039441

4292749 - 4300729

7981

ENSAPLT00000002591

4296814 - 4300729

3916