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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4321313_4321519_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4321313 - 4321519

Intron Length:

207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

CCCGGGGCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

GGGCCCCCAGCC

Flanking Amino Acid:

VMTAAHCPIPRRNPSVRVVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

64.9

0.37

29.8

Major PPT

53.8

0.09

44.8

36.5

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

40.7

-0.7

1.9

47.22

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048412

4316298 - 4322684

6387