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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4321665_4322020_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4321665 - 4322020

Intron Length:

356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

GCTCCCTGCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGGAAC

U12 Branch Point Sequence:

CAAGGAGGAACC

Flanking Amino Acid:

TVDNDIRLLRLNRSATLNKF

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

56.7

42.7

Major BPS

39.7

-0.6

1.4

39.1

Major PPT

65.8

0.36

57.1

38.6

Minor 5ss

33.3

-1.9

35.1

Minor BPS

32.5

-1.3

2.3

38.14

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048412

4316298 - 4322684

6387