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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4322282_4322357_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4322282 - 4322357

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CCTCGCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCTAT

U12 Branch Point Sequence:

GGGGTGCTATCC

Flanking Amino Acid:

RNATLRGVCAGDSGGPLVFK

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

46.4

-0.2

1.5

44.2

48.3

Major PPT

71.3

0.48

0.8

64.7

30.8

Minor 5ss

-2.5

33.4

41.6

Minor BPS

34.6

-1.1

2.2

39.62

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048412

4316298 - 4322684

6387