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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4360264_4360478_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4360264 - 4360478

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GCAGCCCTCACA

Flanking Amino Acid:

RESSHSRHSSAASGASGSYS

Intron Amino Acid Position:

664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

69.3

0.43

32.5

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

44.8

-0.4

2.1

53.46

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048170

4356343 - 4362226

5884

ENSAPLT00000047509

4354509 - 4362226

7718

ENSAPLT00000034450

4355111 - 4361273

6163