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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4360961_4361186_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4360961 - 4361186

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

CTGGTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

GTTTTTGTGACA

Flanking Amino Acid:

IEPVDKINTEVVESTRVGRH

Intron Amino Acid Position:

748

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

71.3

37.2

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

0.41

0.9

58.4

38.4

Minor 5ss

-2.1

3.3

42.6

44.4

Minor BPS

53.2

0.09

69.98

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048170

4356343 - 4362226

5884

ENSAPLT00000047509

4354509 - 4362226

7718

ENSAPLT00000034450

4355111 - 4361273

6163