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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4369879_4389235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4369879 - 4389235

Intron Length:

19357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

ATGTGTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TATTACATACAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

77.9

31.9

Major BPS

70.8

0.52

70.6

31.6

Major PPT

70.7

0.47

67.5

Minor 5ss

30.5

-2.2

3.5

41.8

45.1

Minor BPS

46.2

-0.3

2.1

63.32

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027985

4364086 - 4389338

25253