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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4379907_4383791_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4379907 - 4383791

Intron Length:

3885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

CTTTTTTCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AACTTTTTAATC

Flanking Amino Acid:

MDGIVQDITVGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

65.8

40.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

92.1

0.95

0.6

87.6

22.7

Minor 5ss

29.6

-2.3

2.7

28.8

35.5

Minor BPS

65.3

0.46

1.2

64.86

35.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028118

4379899 - 4419218

39320