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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4384408_4406970_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4384408 - 4406970

Intron Length:

22563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCTGG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

GTCAGTTTACCT

Flanking Amino Acid:

MKAHSWGMRGSDELFSTC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

58.4

43.1

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

37.9

-1.4

43.6

Minor BPS

46.9

-0.1

64.7

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036098

4384295 - 4419218

34924