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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4407847_4407974_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4407847 - 4407974

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTTTTTTTTACA

Flanking Amino Acid:

MSKTMCIQTLANGNDSKKFK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

74.9

38.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

98.8

1.1

0.5

95.2

16.3

Minor 5ss

39.1

-1.2

2.8

40.9

45.3

Minor BPS

71.2

0.66

1.5

82.45

31.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032672

4407533 - 4419218

11686