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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4417489_4417873_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4417489 - 4417873

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TTAACTGTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

CTGTCTTTAACT

Flanking Amino Acid:

QMADGNQAQLAMSHLNGQKL

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.6

41.3

Major BPS

74.7

0.61

65.9

40.9

Major PPT

75.5

0.57

68.6

41.8

Minor 5ss

38.9

-1.3

2.9

45.6

43.8

Minor BPS

80.9

1.05

1.1

87.35

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032672

4407533 - 4419218

11686

ENSAPLT00000028118

4379899 - 4419218

39320

ENSAPLT00000006450

4401883 - 4419218

17336

ENSAPLT00000036098

4384295 - 4419218

34924