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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4418091_4418328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4418091 - 4418328

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

TTATTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

CTACATTTGACT

Flanking Amino Acid:

PSATLHLSNIPPSITEEDLK

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.3

76.5

39.2

Major BPS

68.1

0.45

58.1

38.5

Major PPT

86.3

0.82

0.9

84.8

35.6

Minor 5ss

42.2

-0.9

2.8

59.5

38.1

Minor BPS

55.2

0.24

1.5

70.25

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036098

4384295 - 4419218

34924

ENSAPLT00000032672

4407533 - 4419218

11686

ENSAPLT00000028118

4379899 - 4419218

39320

ENSAPLT00000006450

4401883 - 4419218

17336