Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_4504377_4504931_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4504377 - 4504931

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTGAC

U12 Branch Point Sequence:

CGATGAGTGACT

Flanking Amino Acid:

ALVTSWLFIQHSMIYFFHHY

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

81.3

32.8

Major BPS

48.3

-0.1

1.3

40.8

41.4

Major PPT

81.4

0.71

0.8

73.4

37.1

Minor 5ss

30.6

-2.2

2.6

36.7

40.4

Minor BPS

39.9

-0.7

2.5

57.52

45.1

Associated Gene:

Gene:

TMEM259

Ensembl Gene ID:

ENSAPLG00000007277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007568

4502675 - 4511699

9025