Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_4506536_4507451_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4506536 - 4507451

Intron Length:

916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TCTCATATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTTCTCATATTT

Flanking Amino Acid:

LAAFVIMVIFTLSVSMLLRY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

64.4

42.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

80.7

0.69

0.9

77.6

Minor 5ss

42.2

-0.9

2.8

55.2

43.3

Minor BPS

1.8

70.9

Associated Gene:

Gene:

TMEM259

Ensembl Gene ID:

ENSAPLG00000007277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007568

4502675 - 4511699

9025