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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4509480_4511517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4509480 - 4511517

Intron Length:

2038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGACA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAA

U12 Branch Point Sequence:

TGCTGTTGAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.7

35.1

Major BPS

59.7

0.24

1.2

52.7

43.2

Major PPT

81.6

0.71

0.7

75.8

26.2

Minor 5ss

31.9

-2.1

3.1

40.7

45.3

Minor BPS

44.7

-0.4

55.58

42.9

Associated Gene:

Gene:

TMEM259

Ensembl Gene ID:

ENSAPLG00000007277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007568

4502675 - 4511699

9025