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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4545928_4546260_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4545928 - 4546260

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGGGTT

5'SS Class:

major

3'SS Sequence:

CCTCTTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CATTGCTGACCC

Flanking Amino Acid:

VETIAVSFSSTVSEFLMGEV

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

76.9

38.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

77.6

0.62

0.7

71.8

26.4

Minor 5ss

36.5

-1.5

3.8

54.6

43.4

Minor BPS

46.8

-0.2

2.1

60.14

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008725

4540797 - 4558272

17476