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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4546334_4546604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4546334 - 4546604

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCAATTTCTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

CTTTTCCCAATT

Flanking Amino Acid:

LSIPPSDQNQSMESLYSGIS

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

69.2

0.48

37.1

Major PPT

62.8

0.29

1.1

59.9

40.5

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

54.1

0.21

1.9

76.34

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008725

4540797 - 4558272

17476