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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4551330_4551692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4551330 - 4551692

Intron Length:

363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAGGTGAC

5'SS Class:

major

3'SS Sequence:

GTTCTGCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

CGTGGCTGAGTT

Flanking Amino Acid:

KDENAASFEQSINGITPEMT

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

60.4

39.3

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

75.8

0.58

0.9

69.8

36.6

Minor 5ss

32.9

-2

3.4

38.9

Minor BPS

42.1

-0.5

2.1

57.07

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008725

4540797 - 4558272

17476