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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4551857_4552392_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4551857 - 4552392

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAACCTG

5'SS Class:

major

3'SS Sequence:

CTCTGCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGAGCAT

U12 Branch Point Sequence:

CCTGTCCCAGCT

Flanking Amino Acid:

VYFQGAECEECYLACHKKCL

Intron Amino Acid Position:

735

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

62.1

44.2

Major BPS

44.4

-0.3

1.5

49.1

44.8

Major PPT

82.1

0.72

0.8

76.1

32.5

Minor 5ss

35.4

-1.7

3.2

46.7

48.6

Minor BPS

40.6

-0.6

55.93

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008725

4540797 - 4558272

17476