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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4554390_4554533_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4554390 - 4554533

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTCTCACGAGCT

Flanking Amino Acid:

TLQYLLQHLRRIVEVEQDNK

Intron Amino Acid Position:

924

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

72.7

0.56

30.1

Major PPT

71.5

0.48

0.9

64.9

36.4

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

42.3

-0.5

2.2

62.93

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008725

4540797 - 4558272

17476