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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4555137_4555564_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4555137 - 4555564

Intron Length:

428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGCATCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAT

U12 Branch Point Sequence:

GCTCCCTGCATC

Flanking Amino Acid:

SLDYSTDSFGGSGDRSVDSD

Intron Amino Acid Position:

1046

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

74.1

38.3

Major BPS

50.1

1.4

43.2

Major PPT

69.4

0.44

0.9

65.8

35.7

Minor 5ss

38.3

-1.3

2.8

40.3

45.6

Minor BPS

47.6

-0.2

1.9

57.43

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008725

4540797 - 4558272

17476