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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4560631_4560720_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4560631 - 4560720

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGCTGC

5'SS Class:

major

3'SS Sequence:

GGTTTGTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

CTGGCTGTAACC

Flanking Amino Acid:

PTDQMFVFFPEEPKVGIKTI

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.1

51.4

42.7

Major BPS

62.2

0.3

1.2

38.7

Major PPT

76.6

0.6

69.6

41.6

Minor 5ss

37.8

-1.4

3.3

49.6

47.1

Minor BPS

48.9

-0.1

2.1

61.04

45.1

Associated Gene:

Gene:

POLR2E

Ensembl Gene ID:

ENSAPLG00000023010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022576

4559069 - 4561696

2628