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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4561754_4561883_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4561754 - 4561883

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCGG

5'SS Class:

major

3'SS Sequence:

CCCAATCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCAAT

U12 Branch Point Sequence:

CCCCCCCCAATC

Flanking Amino Acid:

DGNDVSLERYRGSVCIITNV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

55.2

Major BPS

48.8

-0

1.3

56.3

37.4

Major PPT

64.7

0.33

0.9

57.2

32.9

Minor 5ss

28.8

-2.4

3.4

38.1

46.9

Minor BPS

44.2

-0.4

1.8

48.37

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029257

4560614 - 4561923

1310