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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4562301_4562646_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4562301 - 4562646

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

GGGTCAGGGCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

CCACCCCCCACG

Flanking Amino Acid:

EQPKGRGTLGKLTRLGSALL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

0.9

68.6

36.4

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

47.9

-0.1

1.2

35.5

44.9

Minor 5ss

29.3

-2.4

3.1

32.9

35.6

Minor BPS

38.2

-1

2.1

38.61

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008024

4562209 - 4563300

1092