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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4568501_4568839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4568501 - 4568839

Intron Length:

339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCAGC

5'SS Class:

major

3'SS Sequence:

TGTCCCCATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

GTGCTCTGAACT

Flanking Amino Acid:

PQDGQVVFYKISVDRGLKWE

Intron Amino Acid Position:

960

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.1

67.1

44.6

Major BPS

69.8

0.49

37.5

Major PPT

69.8

0.45

0.9

67.2

34.3

Minor 5ss

38.3

-1.3

3.1

51.6

45.2

Minor BPS

62.2

0.46

1.5

75.09

41.2

Associated Gene:

Gene:

SBNO2

Ensembl Gene ID:

ENSAPLG00000007158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043995

4565678 - 4592122

26445

ENSAPLT00000029855

4565678 - 4620526

54849

ENSAPLT00000007481

4565678 - 4587875

22198