Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_4569266_4569588_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4569266 - 4569588

Intron Length:

323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTGTC

5'SS Class:

major

3'SS Sequence:

CGTGCTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TCTCCCCTGACC

Flanking Amino Acid:

MKYGTVPMEKDCSITKFLNR

Intron Amino Acid Position:

880

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

70.9

40.8

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

76.3

0.59

0.9

69.1

Minor 5ss

35.7

-1.6

3.5

43.5

44.3

Minor BPS

61.6

0.35

1.7

72.51

38.5

Associated Gene:

Gene:

SBNO2

Ensembl Gene ID:

ENSAPLG00000007158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029855

4565678 - 4620526

54849

ENSAPLT00000007481

4565678 - 4587875

22198

ENSAPLT00000043995

4565678 - 4592122

26445