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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4572981_4573952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4572981 - 4573952

Intron Length:

972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGAGCA

5'SS Class:

major

3'SS Sequence:

CTCTCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGTGCCCTGACA

Flanking Amino Acid:

REKGTGIKRKRKMRGRCAKA

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.3

68.7

36.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

75.1

0.57

0.7

69.2

24.6

Minor 5ss

32.1

-2

3.3

39.6

Minor BPS

59.1

0.28

1.8

72.29

39.4

Associated Gene:

Gene:

SBNO2

Ensembl Gene ID:

ENSAPLG00000007158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043995

4565678 - 4592122

26445

ENSAPLT00000029855

4565678 - 4620526

54849

ENSAPLT00000007481

4565678 - 4587875

22198