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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4670894_4671352_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4670894 - 4671352

Intron Length:

459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

TTCTGGTGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

CTCTCAGTGACC

Flanking Amino Acid:

AVTMDMLDLATAKSNLEKAI

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.3

63.5

42.9

Major BPS

58.6

0.22

1.5

38.9

Major PPT

70.6

0.46

68.4

42.1

Minor 5ss

32.5

-2

2.7

41.4

38.2

Minor BPS

47.3

-0.2

2.3

62.53

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042359

4670349 - 4672503

2155