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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4697916_4698084_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4697916 - 4698084

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCGGCAGCC

5'SS Class:

weak_major

3'SS Sequence:

GCTGTCAGCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

AGGAAAATAACC

Flanking Amino Acid:

AAAAPPALGVGSWHRAGVAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.3

0.03

1.3

54.7

38.1

Major BPS

61.3

0.28

30.6

Major PPT

46.1

-0.2

1.7

50.7

42.7

Minor 5ss

19.6

-3.5

24.2

37.4

Minor BPS

42.1

-0.6

1.9

50.3

38.9

Associated Gene:

Gene:

MIDN

Ensembl Gene ID:

ENSAPLG00000028424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039730

4697801 - 4701636

3836