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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4737825_4738144_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4737825 - 4738144

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

GAGCACTCACTC

Flanking Amino Acid:

AALYFLLRAVRSRPKGPREL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

64.9

0.37

29.8

Major PPT

70.3

0.46

66.2

40.8

Minor 5ss

-2.5

33.4

41.6

Minor BPS

40.6

-0.7

1.8

43.33

37.5

Associated Gene:

Gene:

FAM174C

Ensembl Gene ID:

ENSAPLG00000006392

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006617

4737562 - 4738307

746