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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4777938_4778045_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4777938 - 4778045

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTGTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

AAAAACATAACC

Flanking Amino Acid:

GRGRGRGFSRGGGDRGYGGS

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

70.2

0.45

1.1

67.7

42.7

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

48.4

-0.1

1.8

58.66

38.8

Associated Gene:

Gene:

CIRBP

Ensembl Gene ID:

ENSAPLG00000016807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046413

4775910 - 4779595

3686

ENSAPLT00000028598

4776216 - 4779595

3380

ENSAPLT00000025687

4776216 - 4779595

3380