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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4778185_4778550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4778185 - 4778550

Intron Length:

366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGGTTGTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

GCAACCTGACTT

Flanking Amino Acid:

KDAMMAMNGKSVDGRQIRVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

66.3

0.37

1.1

65.8

45.3

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

-0.1

1.8

59.3

43.8

Associated Gene:

Gene:

CIRBP

Ensembl Gene ID:

ENSAPLG00000016807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046413

4775910 - 4779595

3686

ENSAPLT00000028598

4776216 - 4779595

3380

ENSAPLT00000025687

4776216 - 4779595

3380