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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4794543_4796570_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4794543 - 4796570

Intron Length:

2028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

TTGTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGAGAC

U12 Branch Point Sequence:

GCCGCTGAGACC

Flanking Amino Acid:

VLLRLSHPNIIKLKEIFETP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

72.6

38.2

Major BPS

46.7

-0.2

1.2

41.8

39.2

Major PPT

83.4

0.75

0.8

77.6

31.1

Minor 5ss

36.5

-1.5

2.9

48.4

41.7

Minor BPS

37.7

-0.9

2.2

40.88

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020427

4794082 - 4801562

7481