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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4798277_4798613_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4798277 - 4798613

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

AAATTGGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAC

U12 Branch Point Sequence:

TGTGCCTGAAAT

Flanking Amino Acid:

DEVSLNAKDLVRKLIVLDPQ

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

73.6

30.3

Major BPS

58.2

0.2

49.5

35.1

Major PPT

63.6

0.31

1.1

55.2

44.7

Minor 5ss

27.7

-2.6

31.2

36.9

Minor BPS

62.3

0.47

1.7

79.39

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020427

4794082 - 4801562

7481