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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4803128_4803563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4803128 - 4803563

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTGG

5'SS Class:

major

3'SS Sequence:

TTTTTTAATGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATG

Flanking Amino Acid:

KRRGRLWPAKVLCKSGDAGK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

63.7

43.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.72

0.8

79.2

33.1

Minor 5ss

35.5

-1.6

3.3

46.8

48.5

Minor BPS

71.7

0.54

1.2

69.97

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033669

4802864 - 4807265

4402