Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_4815211_4815293_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4815211 - 4815293

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGTGG

5'SS Class:

major

3'SS Sequence:

CACTGTGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CACCTCTCACCC

Flanking Amino Acid:

WHTHQFAFIKDHAFRLLQPG

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

61.5

45.6

Major BPS

72.7

0.56

30.1

Major PPT

64.2

0.32

57.1

38.3

Minor 5ss

35.1

-1.7

3.4

46.9

48.5

Minor BPS

44.4

-0.4

1.8

48.46

41.5

Associated Gene:

Gene:

GAMT

Ensembl Gene ID:

ENSAPLG00000019872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039539

4811449 - 4816332

4884