Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_4823910_4824338_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4823910 - 4824338

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CTTCTTTTAACA

Flanking Amino Acid:

VGGLDWSTTQETLRSYFSQY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

30.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

83.5

0.75

0.8

80.3

30.2

Minor 5ss

45.5

-0.5

2.9

64.1

47.4

Minor BPS

71.8

0.68

1.2

75.92

35.5

Associated Gene:

Gene:

DAZAP1

Ensembl Gene ID:

ENSAPLG00000005606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020856

4822089 - 4843554

21466

ENSAPLT00000005834

4822611 - 4841124

18514