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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4825627_4828011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4825627 - 4828011

Intron Length:

2385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTAGAAT

U12 Branch Point Sequence:

GTTAGTAGAATT

Flanking Amino Acid:

LREYFKKFGVVTEVVMIYDA

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

75.8

35.2

Major BPS

-0.1

1.6

45.4

Major PPT

88.3

0.86

0.7

80.7

31.3

Minor 5ss

30.6

-2.2

2.9

Minor BPS

43.2

-0.4

63.3

Associated Gene:

Gene:

DAZAP1

Ensembl Gene ID:

ENSAPLG00000005606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020856

4822089 - 4843554

21466

ENSAPLT00000005834

4822611 - 4841124

18514