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Intron Name: Anas_platyrhynchos_platyrhynchos_29_505103_506080_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

505103 - 506080

Intron Length:

978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCACCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTTACT

Flanking Amino Acid:

FVLLLLLCFLIVSCLRRKSQ

Intron Amino Acid Position:

817

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

72.3

37.7

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

81.6

0.71

0.8

75.6

34.3

Minor 5ss

33.2

-1.9

3.2

40.6

40.8

Minor BPS

0.84

1.5

91.27

31.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001209

505004 - 516642

11639