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Intron Name: Anas_platyrhynchos_platyrhynchos_29_514127_514229_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

514127 - 514229

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

ACTAAATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TATTACTAAATT

Flanking Amino Acid:

KSTEKVMYNYVDHLLQKSSI

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

74.7

41.5

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

65.9

0.36

55.5

43.9

Minor 5ss

40.3

-1.1

3.1

54.9

42.3

Minor BPS

63.7

0.51

1.8

82.21

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001209

505004 - 516642

11639