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Intron Name: Anas_platyrhynchos_platyrhynchos_29_515960_516077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

515960 - 516077

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTATCTTGTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TATTTTATAATG

Flanking Amino Acid:

SAANQNLTYLLDRMLKNSSI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

80.1

28.4

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

77.1

0.61

76.8

37.2

Minor 5ss

39.5

-1.2

2.9

49.4

41.4

Minor BPS

58.1

0.12

1.6

64.77

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001209

505004 - 516642

11639