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Intron Name: Anas_platyrhynchos_platyrhynchos_29_550849_551262_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

550849 - 551262

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGAT

5'SS Class:

major

3'SS Sequence:

CTCTTGCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TGCTACCAAATG

Flanking Amino Acid:

VFQLGFVRNLLKILQKVSAW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

74.1

36.5

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

82.2

0.72

0.8

76.3

32.3

Minor 5ss

33.1

-1.9

3.5

45.5

Minor BPS

43.1

-0.6

2.1

49.6

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012159

550762 - 553470

2709