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Intron Name: Anas_platyrhynchos_platyrhynchos_29_551486_551652_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

551486 - 551652

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TGGATCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTATTCTGTATG

Flanking Amino Acid:

VDWGQSNMPKEIREALINPS

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

37.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

70.5

0.46

62.8

39.5

Minor 5ss

32.6

-2

3.4

40.6

45.1

Minor BPS

49.5

-0.1

1.8

60.49

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012159

550762 - 553470

2709